Package: odeGUTS 1.0.2.9000

odeGUTS: Solve ODE for GUTS-RED-SD and GUTS-RED-IT Using Compiled Code

Allows performing forwards prediction for the General Unified Threshold model of Survival using compiled ode code. This package was created to avoid dependency with the 'morse' package that requires the installation of 'JAGS'. This package is based on functions from the 'morse' package v3.3.1: Virgile Baudrot, Sandrine Charles, Marie Laure Delignette-Muller, Wandrille Duchemin, Benoit Goussen, Nils Kehrein, Guillaume Kon-Kam-King, Christelle Lopes, Philippe Ruiz, Alexander Singer and Philippe Veber (2021) <https://CRAN.R-project.org/package=morse>.

Authors:Benoit Goussen [aut, cre]

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odeGUTS.pdf |odeGUTS.html
odeGUTS/json (API)
NEWS

# Install 'odeGUTS' in R:
install.packages('odeGUTS', repos = c('https://bgoussen.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/bgoussen/odeguts/issues

Datasets:
  • fit_odeGUTS - Model calibration results for a GUTS-SD theoretical species exposed to a compound.

On CRAN:

4 exports 2 stars 1.11 score 24 dependencies 1 dependents 3 scripts 298 downloads

Last updated 1 years agofrom:ac2d1cddd6. Checks:OK: 1 NOTE: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 23 2024
R-4.5-win-x86_64NOTEAug 23 2024
R-4.5-linux-x86_64NOTEAug 23 2024
R-4.4-win-x86_64NOTEAug 23 2024
R-4.4-mac-x86_64NOTEAug 23 2024
R-4.4-mac-aarch64NOTEAug 23 2024
R-4.3-win-x86_64NOTEAug 23 2024
R-4.3-mac-x86_64NOTEAug 23 2024
R-4.3-mac-aarch64NOTEAug 23 2024

Exports:%>%predict_Nsurv_checkpredict_Nsurv_odepredict_ode

Dependencies:clicpp11deSolvedplyrfansigenericsgluelatticelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithrzoo

Readme and manuals

Help Manual

Help pageTopics
Model calibration results for a GUTS-SD theoretical species exposed to a compound.fit_odeGUTS
Checking goodness-of-fit method for 'survFitPredict' and 'survFitPredict_Nsurv' objectspredict_Nsurv_check predict_Nsurv_check.survFitPredict_Nsurv
Predict method for 'survFit' objectspredict_Nsurv_ode predict_Nsurv_ode.survFit predict_ode predict_ode.survFit